2018

Teodoro D, Sundvall E, Junior MJoão, Ruch P, Freire SMiranda. ORBDA: An openEHR benchmark dataset for performance assessment of electronic health record servers. PloS one. 2018;13:e0190028. PDF icon journal.pone_.0190028.pdf (3.18 MB)
Pasche E, Gobeill J, Mottin L, Mottaz A, Teodoro D, Van Rijen P, et al.. Customizing a Variant Annotation-Support Tool: an Inquiry into Probability Ranking Principles for TREC Precision Medicine. TREC 2017 Proceedings [Internet]. 2018;. https://trec.nist.gov/pubs/trec26/papers/BiTeM-PM.pdfPDF icon BiTeM-PM-2017.pdf (318.65 KB)

2017

Pasche E, Chinali M, Gobeill J, Ruch P. Development and Evaluation of a Case-Based Retrieval Service. Studies in health technology and informatics. 2017;235:186. PDF icon developmentCBR_preprint.pdf (176.88 KB)
Mottin L, Pasche E, Gobeill J, de Laval VRech, Gleizes A, Michel P-A?, et al.. Triage by ranking to support the curation of protein interactions. Database [Internet]. 2017;2017(1). https://academic.oup.com/database/article-lookup/doi/10.1093/database/bax040PDF icon bax040.pdf (830.35 KB)

2016

Mottin L, Gobeill J, Mottaz A, Pasche E, Gaudinat A, Ruch P. BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction. In CLEF 2016 [Internet]. Evora, Portugal: CEUR-WS.org - CEUR Workshop Proceedings; 2016. http://ceur-ws.org/Vol-1609/16090094.pdfPDF icon BiTeM at CLEF eHealth Evaluation Lab 2016.pdf (307.61 KB)
Mottin L, Gobeill J, Pasche E, Michel P-A, Cusin I, Gaudet P, et al.. neXtA5: accelerating annotation of articles via automated approaches in neXtProt. Database (Oxford) [Internet]. 2016;2016. http://database.oxfordjournals.org/content/2016/baw098.fullPDF icon baw098.pdf (1.04 MB)

2015

Gobeill J, Gaudinat A, Ruch P. Instance-Based Learning for Tweet Monitoring and Categorization. In Experimental IR Meets Multilinguality, Multimodality, and Interaction. Springer; 2015. pp. 235–240. PDF icon 370583_1_En_22_Chapter_OnlinePDF.pdf (294.92 KB)
Gobeill J, Gaudinat A, Pasche E, Vishnyakova D, Gaudet P, Bairoch A, et al.. Deep Question Answering for protein annotation. Database (Oxford). 2015;2015. PDF icon Database-2015-Gobeill-database_bav081.pdf (587.33 KB)

2014

Gobeill J, Gaudinat A, Ruch P. Instance-based Learning for Tweet Categorization in {CLEF} RepLab 2014. In Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September 15-18, 2014. [Internet]. 2014. http://ceur-ws.org/Vol-1180/CLEF2014wn-Rep-GobeilEt2014.pdfPDF icon Working note CLEF.pdf (989.79 KB)
Gobeill J, Pasche E, Vishnyakova D, Ruch P. Closing the loop: from paper to protein annotation using supervised Gene Ontology classification. Database (Oxford). 2014;2014. PDF icon Closing the loop.pdf (362.62 KB)

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