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Book Chapter

Gobeill J, Gaudinat A, Ruch P. Instance-Based Learning for Tweet Monitoring and Categorization. In: Experimental IR Meets Multilinguality, Multimodality, and Interaction. Experimental IR Meets Multilinguality, Multimodality, and Interaction. Springer; 2015. pp. 235–240.

370583_1_En_22_Chapter_OnlinePDF.pdf (294.92 KB)

Conference Paper

Gaudinat A, Boyer C. Automatic extraction of MeSH terms from Medline abstracts. In: Workshop on natural language processing in biomedical applications. Workshop on natural language processing in biomedical applications. ; 2002. pp. 53–57. Available from: http://bitem.hesge.ch/sites/default/files/biblio/2002_ag.pdf

2002_ag.pdf (88.41 KB)

Teodoro D, Gobeill J, Pasche E, Ruch P, Vishnyakova D, Lovis C. Automatic IPC encoding and novelty tracking for effective patent mining. In: The 8th NTCIR Workshop Meeting on Evaluation of Information Access Technologies: Information Retrieval, Question Answering, and Cross-Lingual Information Access. The 8th NTCIR Workshop Meeting on Evaluation of Information Access Technologies: Information Retrieval, Question Answering, and Cross-Lingual Information Access. Tokyo, Japan; 2010. pp. 309-317. Available from: http://research.nii.ac.jp/ntcir/workshop/OnlineProceedings8/NTCIR/03-NTCIR8-PATMN-TeodoroD.pdf

BiTeM-PATMN-NTCIR8.pdf (313.05 KB)

Teodoro D, Gobeill J, Pasche E, Vishnyakova D, Ruch P, Lovis C. Automatic Prior Art Searching and Patent Encoding at CLEF-IP '10. In: CLEF (Notebook Papers/LABs/Workshops). CLEF (Notebook Papers/LABs/Workshops). ; 2010. Available from: http://clef2010.org/resources/proceedings/clef2010labs_submission_119.pdf

Automatic prior art searching and patent encoding at CLEF-IP '10.pdf (293.03 KB)

Naderi N, Gobeill J, Teodoro D, Pasche E, Ruch P. A Baseline Approach for Early Detection of Signs of Anorexia and Self-harm in Reddit Posts. In: Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. ; 2019. Available from: http://ceur-ws.org/Vol-2380/paper_111.pdf

Mottin L, Gobeill J, Mottaz A, Pasche E, Gaudinat A, Ruch P. BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction. In: CLEF 2016. CLEF 2016. Evora, Portugal: CEUR-WS.org - CEUR Workshop Proceedings; 2016. Available from: http://ceur-ws.org/Vol-1609/16090094.pdf

BiTeM at CLEF eHealth Evaluation Lab 2016.pdf (307.61 KB)

Knafou J, Naderi N, Copara J, Teodoro D, Ruch P. BiTeM at WNUT 2020 Shared Task-1: Named Entity Recognition over Wet Lab Protocols using an Ensemble of Contextual Language Models. In: Proceedings of the Sixth Workshop on Noisy User-generated Text (W-NUT 2020). Proceedings of the Sixth Workshop on Noisy User-generated Text (W-NUT 2020). Online: Association for Computational Linguistics; 2020. Available from: https://www.aclweb.org/anthology/2020.wnut-1.40

2020.wnut-1.40.pdf (842.21 KB)

Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: IEEE Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE Nuclear Science Symposium Conference Record, 2008. NSS'08. ; 2008. pp. 3475–3482.

Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. IEEE; 2008. pp. 3475–3482.

GBNSSMIC2008.pdf (626.57 KB)

Ruch P, Gaudinat A. Comparing corpora and lexical ambiguity. In: Proceedings of the Workshop on Comparing Corpora. Proceedings of the Workshop on Comparing Corpora. Association for Computational Linguistics; 2000. pp. 14–19. Available from: http://bitem.hesge.ch/sites/default/files/biblio/RUCH_2000.pdf

RUCH_2000.pdf (514.87 KB)

Copara J, Knafou J, Naderi N, Moro C, Ruch P, Teodoro D. Contextualized French Language Models for Biomedical Named Entity Recognition. In: Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 31e édition), Traitement Automatique des Langues Naturelles (TALN, 27e édition), Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues. Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 31e édition), Traitement Automatique des Langues Naturelles (TALN, 27e édition), Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues. ATALA; 2020.

Van Rijen P, Teodoro D, Naderi N, Mottin L, Knafou J, Jeffryes M, Ruch P. A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts. In: Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. ; 2019. Available from: http://ceur-ws.org/Vol-2380/paper_79.pdf

Choquet R, KARLSSON D, Schober D, DAUMKE P, Ruch P, Teodoro D, Mels G, ASSELE A. Exchanging biomedical information at large scale using the Semantic Web. In: MIE 2011 - EFMI TRACE Working Group Workshop. MIE 2011 - EFMI TRACE Working Group Workshop. ; 2011.

Goldman JP, Gaudinat A, Nerima L, Wehrli E. FipsVox: a French TTS based on a syntactic parser. In: 4th. ISCA international Workshop on speech synthesis (SSW4). 4th. ISCA international Workshop on speech synthesis (SSW4). Citeseer; 2001. Available from: http://bitem.hesge.ch/sites/default/files/biblio/GOLDMAN_2001.pdf

GOLDMAN_2001.pdf (127.93 KB)

Gobeill J, Gaudinat A, Ruch P. Instance-based Learning for Tweet Categorization in {CLEF} RepLab 2014. In: Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September 15-18, 2014. Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September 15-18, 2014. ; 2014. Available from: http://ceur-ws.org/Vol-1180/CLEF2014wn-Rep-GobeilEt2014.pdf

Working note CLEF.pdf (989.79 KB)

Vishnyakova D, Pasche E, Douglas T, Lovis C, Ruch P. Pathogens and Gene Product Normalization in the Biomedical Literature. In: Large Scale Projects in Ehealth: Partnership in Modernization. Large Scale Projects in Ehealth: Partnership in Modernization. Ios PressInc; 2012. pp. 89–93.

STC2012_Vishnyakova.pdf (294.94 KB)

Gobeill J, Patsche E, Theodoro D, Veuthey A-L, Lovis C, Ruch P. Question answering for biology and medicine. In: Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on. Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on. IEEE; 2009. pp. 1–5.

ITAB2009 - Gobeill.pdf (1 MB)

Gaudinat A, Goldman JP, Wehrli E. Syntax-based speech recognition: how a syntactic parser can help a recognition system. In: Sixth European Conference on Speech Communication and Technology. Sixth European Conference on Speech Communication and Technology. ; 1999.

Vishnyakova D, Pasche E, Lovis C, Ruch P. System zur Unterstützung der Kuration der Toxikogenomik in der medizinischen Literatur. In: Swiss Medical Informatics. Vol. 28. Swiss Medical Informatics. ; 2012. Available from: http://www.medical-informatics.ch/index.php/smiojs/article/view/6

Conference Proceedings