BITEM Biblio

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A
Britan A, Cusin I, Hinard V, Mottin L, Pasche E, Gobeill J, de Laval VRech, Gleizes A, Teixeira D, Michel P-A, et al. Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt. Database [Internet]. 2018 ;2018. Available from: https://academic.oup.com/database/article/doi/10.1093/database/bay129/5255187http://academic.oup.com/database/article-pdf/doi/10.1093/database/bay129/27329435/bay129.pdfPDF icon bay129.pdf (18.93 MB)
Britan A, Cusin I, Hinard V, Mottin L, Pasche E, Gobeill J, de Laval VRech, Gleizes A, Teixeira D, Michel P-A, et al. Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt. Database [Internet]. 2018 ;2018. Available from: https://academic.oup.com/database/article/doi/10.1093/database/bay129/5255187http://academic.oup.com/database/article-pdf/doi/10.1093/database/bay129/27329435/bay129.pdfPDF icon bay129.pdf (18.93 MB)
Hersh WR, Müller H, Jensen JR, Yang J, Gorman PN, Ruch P. Advancing biomedical image retrieval: development and analysis of a test collection. Journal of the American Medical Informatics Association : JAMIA. 2006 ;13(5):488-96.
Müller H, Boyer C, Gaudinat A, Hersh W, Geissbuhler A. Analyzing web log files of the health on the net HONmedia search engine to define typical image search tasks for image retrieval evaluation. Studies in health technology and informatics. 2007 ;129(Pt 2):1319-23.PDF icon 10.1.1.572.4791.pdf (166.77 KB)
Veuthey A-L, Bridge A, Gobeill J, Ruch P, McEntyre JR, Bougueleret L, Xenarios I. Application of text-mining for updating protein post-translational modification annotation in UniProtKB. BMC Bioinformatics. 2013 ;14(1):104.
Mottin L. Assistance à la curation de publications scientifiques par des méthodes de triage et d’annotation automatiques. [Internet]. 2019 . Available from: https://archive-ouverte.unige.ch/unige:118269PDF icon these_luc_mottin.pdf (4.27 MB)
B
Névéol A, Mary V, Gaudinat A, Boyer C, Rogozan A, Darmoni S. A benchmark evaluation of the French MeSH indexers. Artificial Intelligence in Medicine [Internet]. 2005 :251–255. Available from: http://bitem.hesge.ch/sites/default/files/biblio/Neveol2005d.pdfPDF icon Neveol2005d.pdf (164.81 KB)
Mottin L, Gobeill J, Mottaz A, Pasche E, Gaudinat A, Ruch P. BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction. In: CLEF 2016. CLEF 2016. Evora, Portugal: CEUR-WS.org - CEUR Workshop Proceedings; 2016. Available from: http://ceur-ws.org/Vol-1609/16090094.pdfPDF icon BiTeM at CLEF eHealth Evaluation Lab 2016.pdf (307.61 KB)
Mottin L, Gobeill J, Mottaz A, Pasche E, Gaudinat A, Ruch P. BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction. In: CLEF 2016. CLEF 2016. Evora, Portugal: CEUR-WS.org - CEUR Workshop Proceedings; 2016. Available from: http://ceur-ws.org/Vol-1609/16090094.pdfPDF icon BiTeM at CLEF eHealth Evaluation Lab 2016.pdf (307.61 KB)
C
Buchmuller O, Bonacorsi D, Fanzago F, Gowdy S, Kreuzer P, Malgeri L, Mankel R, Metson S, Panzer-Steindel B, Afonso Sanches J, et al. The CMS CERN Analysis Facility (CAF). Journal of Physics: Conference Series. 2010 ;219:052022.PDF icon The CMS CERN Analysis Facility (CAF).pdf (933.69 KB)
Buchmuller O, Bonacorsi D, Fanzago F, Gowdy S, Kreuzer P, Malgeri L, Mankel R, Metson S, Panzer-Steindel B, Afonso Sanches J, et al. The CMS CERN Analysis Facility (CAF). Journal of Physics: Conference Series. 2010 ;219:052022.PDF icon The CMS CERN Analysis Facility (CAF).pdf (933.69 KB)
Buchmuller O, Bonacorsi D, Fanzago F, Gowdy S, Kreuzer P, Malgeri L, Mankel R, Metson S, Panzer-Steindel B, Afonso Sanches J, et al. The CMS CERN Analysis Facility (CAF). Journal of Physics: Conference Series. 2010 ;219:052022.PDF icon The CMS CERN Analysis Facility (CAF).pdf (933.69 KB)
Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. IEEE; 2008. pp. 3475–3482.PDF icon GBNSSMIC2008.pdf (626.57 KB)
Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. IEEE; 2008. pp. 3475–3482.PDF icon GBNSSMIC2008.pdf (626.57 KB)
Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. IEEE; 2008. pp. 3475–3482.PDF icon GBNSSMIC2008.pdf (626.57 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Copara J, Knafou J, Naderi N, Moro C, Ruch P, Teodoro D. Contextualized French Language Models for Biomedical Named Entity Recognition. In: Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 31e édition), Traitement Automatique des Langues Naturelles (TALN, 27e édition), Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues. Actes de la 6e conférence conjointe Journées d'Études sur la Parole (JEP, 31e édition), Traitement Automatique des Langues Naturelles (TALN, 27e édition), Rencontre des Étudiants Chercheurs en Informatique pour le Traitement Automatique des Langues. ATALA; 2020.

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