BITEM Biblio

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Vishnyakova D, Pasche E, Gobeill J, Gaudinat A, Lovis C, Ruch P. Classification and prioritization of biomedical literature for the comparative toxicogenomics database. Studies in health technology and informatics. 2012 ;180:210-4.PDF icon pmid22874182.pdf (177.05 KB)
Vishnyakova D, Pasche E, Lovis C, Ruch P. System zur Unterstützung der Kuration der Toxikogenomik in der medizinischen Literatur. In: Swiss Medical Informatics. Vol. 28. Swiss Medical Informatics. ; 2012. Available from: http://www.medical-informatics.ch/index.php/smiojs/article/view/6
Vishnyakova D, Gobeill J, Oezdemir-Zaech F, Kreim O, Vachon T, Clade T, Haenning X, Mikhailov D, Ruch P. Electronic processing of informed consents in a global pharmaceutical company environment. Studies in health technology and informatics [Internet]. 2014 ;205:995–999. Available from: http://doc.rero.ch/record/232970/files/Ruch_Gobeill_Processing_of_informed_consents.pdfPDF icon Ruch_Gobeill_Processing_of_informed_consents.pdf (736.99 KB)
Vishnyakova D, Pasche E, Lovis C, Ruch P. Utilization of ontology look-up services in information retrieval for biomedical literature. Stud Health Technol Inform. 2013 ;186:155-9.PDF icon efm2013.pdf (274.96 KB)
Vishnyakova D, Pasche E, Ruch P. Selection of relevant articles for curation for the Comparative Toxicogenomic Database. 2012 BioCreative Workshop [Internet]. 2012 :31-38. Available from: http://www.biocreative.org/media/store/files/2012/Proceedings_BC2012_.pdf
Vishnyakova D, Gobeil J, Ruch P. Using a Question-Answering Approach In Machine Reading Task Of Biomedical Texts About The Alzheimer Disease. CLEF 2013 Conference. 2013 ;Vol-1179.PDF icon CLEF2013wn-QA4MRE-VishnyakovaEt2013.pdf (472.09 KB)
Vishnyakova D, Pasche E, Ruch P. Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database. Database [Internet]. 2012 ;2012. Available from: http://database.oxfordjournals.org/content/2012/bas050.full.pdf?keytype=ref&ijkey=cUFGIEaFMb9xzKY
Vishnyakova D, Pasche E, Douglas T, Lovis C, Ruch P. Pathogens and Gene Product Normalization in the Biomedical Literature. In: Large Scale Projects in Ehealth: Partnership in Modernization. Large Scale Projects in Ehealth: Partnership in Modernization. Ios PressInc; 2012. pp. 89–93.PDF icon STC2012_Vishnyakova.pdf (294.94 KB)
Vishnyakova D, Bottone S, Pasche E, Lovis C. Practical implementation of a bridge between legacy EHR system and a clinical research environment. Stud Health Technol Inform. 2014 ;197:29-33.PDF icon SHTI197-0029 (1).pdf (215.19 KB)
Vishnyakova D, Pasche E, Teodoro D, Ruch P, Lovis C. Pathogens and Genome Normalization for Literature-based Knowledge Discovery. 23 rd International Conference of the European Federation for Medical Informatics [Internet]. 2011 . Available from: http://person.hst.aau.dk/ska/mie2011/CD/MIE_2011_Content/Posters/031_or_submission_228_2_am_sm_ok.pdfPDF icon MIE2001_DVISHNYAKOVA_fv.pdf (114.87 KB)
Vishnyakova D, Gobeill J, Oezdemir-Zaech F, Kreim O, Vachon T, Clade T, Haenning X, Mikhailov D, Ruch P. Electronic processing of informed consents in a global pharmaceutical company environment. Studies in health technology and informatics. 2013 ;205:995–999.PDF icon SHTI205-0995 (1).pdf (727.63 KB)
Veuthey A-L, Bridge A, Gobeill J, Ruch P, McEntyre JR, Bougueleret L, Xenarios I. Application of text-mining for updating protein post-translational modification annotation in UniProtKB. BMC Bioinformatics. 2013 ;14(1):104.
Van Rijen P, Teodoro D, Naderi N, Mottin L, Knafou J, Jeffryes M, Ruch P. A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts. In: Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. ; 2019. Available from: http://ceur-ws.org/Vol-2380/paper_79.pdf