BITEM Biblio

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Vishnyakova D, Pasche E, Douglas T, Lovis C, Ruch P. Pathogens and Gene Product Normalization in the Biomedical Literature. In: Large Scale Projects in Ehealth: Partnership in Modernization. Large Scale Projects in Ehealth: Partnership in Modernization. Ios PressInc; 2012. pp. 89–93.PDF icon STC2012_Vishnyakova.pdf (294.94 KB)
Vishnyakova D, Bottone S, Pasche E, Lovis C. Practical implementation of a bridge between legacy EHR system and a clinical research environment. Stud Health Technol Inform. 2014 ;197:29-33.PDF icon SHTI197-0029 (1).pdf (215.19 KB)
Vishnyakova D, Pasche E, Teodoro D, Ruch P, Lovis C. Pathogens and Genome Normalization for Literature-based Knowledge Discovery. 23 rd International Conference of the European Federation for Medical Informatics [Internet]. 2011 . Available from: http://person.hst.aau.dk/ska/mie2011/CD/MIE_2011_Content/Posters/031_or_submission_228_2_am_sm_ok.pdfPDF icon MIE2001_DVISHNYAKOVA_fv.pdf (114.87 KB)
Vishnyakova D, Gobeill J, Oezdemir-Zaech F, Kreim O, Vachon T, Clade T, Haenning X, Mikhailov D, Ruch P. Electronic processing of informed consents in a global pharmaceutical company environment. Studies in health technology and informatics. 2013 ;205:995–999.PDF icon SHTI205-0995 (1).pdf (727.63 KB)
Vishnyakova D, Pasche E, Gobeill J, Gaudinat A, Lovis C, Ruch P. Classification and prioritization of biomedical literature for the comparative toxicogenomics database. Studies in health technology and informatics. 2012 ;180:210-4.PDF icon pmid22874182.pdf (177.05 KB)
Vishnyakova D, Pasche E, Lovis C, Ruch P. System zur Unterstützung der Kuration der Toxikogenomik in der medizinischen Literatur. In: Swiss Medical Informatics. Vol. 28. Swiss Medical Informatics. ; 2012. Available from: http://www.medical-informatics.ch/index.php/smiojs/article/view/6
Vishnyakova D, Gobeill J, Oezdemir-Zaech F, Kreim O, Vachon T, Clade T, Haenning X, Mikhailov D, Ruch P. Electronic processing of informed consents in a global pharmaceutical company environment. Studies in health technology and informatics [Internet]. 2014 ;205:995–999. Available from: http://doc.rero.ch/record/232970/files/Ruch_Gobeill_Processing_of_informed_consents.pdfPDF icon Ruch_Gobeill_Processing_of_informed_consents.pdf (736.99 KB)
Vishnyakova D, Pasche E, Lovis C, Ruch P. Utilization of ontology look-up services in information retrieval for biomedical literature. Stud Health Technol Inform. 2013 ;186:155-9.PDF icon efm2013.pdf (274.96 KB)
Vishnyakova D, Pasche E, Ruch P. Selection of relevant articles for curation for the Comparative Toxicogenomic Database. 2012 BioCreative Workshop [Internet]. 2012 :31-38. Available from: http://www.biocreative.org/media/store/files/2012/Proceedings_BC2012_.pdf
Vishnyakova D, Gobeil J, Ruch P. Using a Question-Answering Approach In Machine Reading Task Of Biomedical Texts About The Alzheimer Disease. CLEF 2013 Conference. 2013 ;Vol-1179.PDF icon CLEF2013wn-QA4MRE-VishnyakovaEt2013.pdf (472.09 KB)
Vishnyakova D, Pasche E, Ruch P. Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database. Database [Internet]. 2012 ;2012. Available from: http://database.oxfordjournals.org/content/2012/bas050.full.pdf?keytype=ref&ijkey=cUFGIEaFMb9xzKY
Veuthey A-L, Bridge A, Gobeill J, Ruch P, McEntyre JR, Bougueleret L, Xenarios I. Application of text-mining for updating protein post-translational modification annotation in UniProtKB. BMC Bioinformatics. 2013 ;14(1):104.
Van Rijen P, Teodoro D, Naderi N, Mottin L, Knafou J, Jeffryes M, Ruch P. A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts. In: Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. Working Notes of CLEF 2019 - Conference and Labs of the Evaluation Forum, Lugano, Switzerland, September 9-12, 2019. ; 2019. Available from: http://ceur-ws.org/Vol-2380/paper_79.pdf