BITEM Biblio

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Goldman JP, Gaudinat A, Nerima L, Wehrli E. FipsVox: a French TTS based on a syntactic parser. In: 4th. ISCA international Workshop on speech synthesis (SSW4). 4th. ISCA international Workshop on speech synthesis (SSW4). Citeseer; 2001. Available from: http://bitem.hesge.ch/sites/default/files/biblio/GOLDMAN_2001.pdfPDF icon GOLDMAN_2001.pdf (127.93 KB)
Gobeill J, Gaudinat A, Pasche E, Teodoro D, Vishnyakova D, Ruch P. BiTeM group report for TREC Medical Records Track 2011. 2011 .PDF icon RUCH_BitemGroupeTRECmedical2011.pdf (285.04 KB)
Gobeill J, Caucheteur D, Michel P-A, Mottin L, Pasche E, Ruch P. SIB Literature Services: RESTful customizable search engines in biomedical literature, enriched with automatically mapped biomedical concepts. Nucleic Acids Res. 2020 ;48(W1):W12-W16.
Gobeill J, Pasche E, Vishnyakova D, Ruch P. Closing the loop: from paper to protein annotation using supervised Gene Ontology classification. Database (Oxford). 2014 ;2014.PDF icon Closing the loop.pdf (362.62 KB)
Gobeill J, Tbahriti I, Ehrler F, Mottaz A, Veuthey A-L, Ruch P. Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction. BMC bioinformatics. 2008 ;9 Suppl 3:S9.
Gobeill J, Gaudinat A, Pasche E, Teodoro D, Vishnyakova D, Ruch P. BiTeM site report for TREC Chemistry 2010: Impact of Citations Feedback for Patent Prior Art Search and Chemical Compounds Expansion for Ad Hoc Retrieval. 2010 .
Gobeill J, Pasche E, Vishnyakova D, Ruch P. Managing the data deluge: data-driven GO category assignment improves while complexity of functional annotation increases. Database (Oxford). 2013 ;2013:bat041.PDF icon Managing data deluge.pdf (192.78 KB)
Gobeill J, Teodoro D, Pasche E, Ruch P. Report on the trec 2009 experiments: Chemical ir track. the Eighteenth Text REtrieval Conference (TREC-18). 2009 .PDF icon Report_on_the_trec_2009_experiments_Chem.pdf (426.58 KB)
Gobeill J, Gaudinat A, Ruch P. Instance-Based Learning for Tweet Monitoring and Categorization. In: Experimental IR Meets Multilinguality, Multimodality, and Interaction. Experimental IR Meets Multilinguality, Multimodality, and Interaction. Springer; 2015. pp. 235–240.PDF icon 370583_1_En_22_Chapter_OnlinePDF.pdf (294.92 KB)
Gobeill J, Patsche E, Theodoro D, Veuthey A-L, Lovis C, Ruch P. Question answering for biology and medicine. In: Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on. Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on. IEEE; 2009. pp. 1–5.PDF icon ITAB2009 - Gobeill.pdf (1 MB)
Gobeill J, Pasche E, Teodoro D, Ruch P. Simple Pre and Post Processing Strategies for Patent Searching in CLEF Intellectual Property Track 2009. Multilingual Information Access Evaluation I. Text Retrieval Experiments. 2010 ;6241:444–451.
Gobeill J, Gaudinat A, Pasche E, Vishnyakova D, Gaudet P, Bairoch A, Ruch P. Deep Question Answering for protein annotation. Database (Oxford). 2015 ;2015.PDF icon Database-2015-Gobeill-database_bav081.pdf (587.33 KB)
Gobeill J, Pasche E, Teodoro D, Ehrler F, Ruch P. BIND: Biomedical Novelty Detection. Journée de la recherche HEG 2009. 2009 :47.
Gobeill J, Gaudinat A, Ruch P. Instance-based Learning for Tweet Categorization in {CLEF} RepLab 2014. In: Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September 15-18, 2014. Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September 15-18, 2014. ; 2014. Available from: http://ceur-ws.org/Vol-1180/CLEF2014wn-Rep-GobeilEt2014.pdfPDF icon Working note CLEF.pdf (989.79 KB)
Gaudinat A. Closing the loops in biomedical informatics from theory to daily practice. Yearbook of medical informatics. 2009 :37-9.
Gaudinat A, Grabar N, Boyer C. Combination of heterogeneous criteria for the automatic detection of ethical principles on health web sites. AMIA .. Annual Symposium proceedings / AMIA Symposium. AMIA Symposium [Internet]. 2007 :264-8. Available from: http://bitem.hesge.ch/sites/default/files/biblio/AMIA-0862-S2007.pdfPDF icon AMIA-0862-S2007.pdf (169.51 KB)
Gaudinat A, Goldman JP, Wehrli E. Syntax-based speech recognition: how a syntactic parser can help a recognition system. In: Sixth European Conference on Speech Communication and Technology. Sixth European Conference on Speech Communication and Technology. ; 1999.
Gaudinat A. Le plaisir de tout conserver sans modération : une question de taille ?. Arbido [Internet]. 2016 ;16(3):26. Available from: http://arbido.ch/fr/edition-article/2016/d%C3%A9truire-pour-conserver/le-plaisir-de-tout-conserver-sans-mod%C3%A9ration-une-question-de-taillePDF icon Gaudinat_arbido_2016_3.pdf (126.61 KB)
Gaudinat A, Joubert M, Aymard S, Falco L, Boyer C, Fieschi M. WRAPIN: new generation health search engine using UMLS knowledge sources for MeSH term extraction from health documentation. Studies in health technology and informatics. 2004 ;107(Pt 1):356-60.
Gaudinat A, Boyer C. Automatic extraction of MeSH terms from Medline abstracts. In: Workshop on natural language processing in biomedical applications. Workshop on natural language processing in biomedical applications. ; 2002. pp. 53–57. Available from: http://bitem.hesge.ch/sites/default/files/biblio/2002_ag.pdfPDF icon 2002_ag.pdf (88.41 KB)
Gaudinat A, Ruch P, Joubert M, Uziel P, Strauss A, Thonnet M, Baud R, Spahni S, Weber P, Bonal J, et al. Health search engine with e-document analysis for reliable search results. International journal of medical informatics [Internet]. 2006 ;75(1):73-85. Available from: http://bitem.hesge.ch/sites/default/files/biblio/AG_IJMI_2006.pdfPDF icon AG_IJMI_2006.pdf (585.54 KB)
Gaudinat A, Cruchet S, Boyer C, Chawdhry P. Enriching the trustworthiness of health-related web pages. Health informatics journal [Internet]. 2011 ;17(2):116-26. Available from: http://bitem.hesge.ch/sites/default/files/Enriching_2011.pdfPDF icon Enriching_2011.pdf (1.05 MB)
Gaudinat A, Grabar N, Boyer C. Machine learning approach for automatic quality criteria detection of health web pages. Studies in health technology and informatics. 2007 ;129(Pt 1):705-9.
Gaudinat A, Grabar N, Boyer C. Automatic Retrieval of Web Pages with Standards of Ethics and Trustworthiness Within a Medical Portal: What a Page Name Tells Us. Artificial Intelligence in Medicine [Internet]. 2007 :185–189. Available from: http://bitem.hesge.ch/sites/default/files/biblio/gaudinat-AIME2007short.pdfPDF icon gaudinat-AIME2007short.pdf (98.57 KB)