BITEM Biblio

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P
Vishnyakova D, Pasche E, Douglas T, Lovis C, Ruch P. Pathogens and Gene Product Normalization in the Biomedical Literature. In: Large Scale Projects in Ehealth: Partnership in Modernization. Large Scale Projects in Ehealth: Partnership in Modernization. Ios PressInc; 2012. pp. 89–93.PDF icon STC2012_Vishnyakova.pdf (294.94 KB)
Vishnyakova D, Pasche E, Teodoro D, Ruch P, Lovis C. Pathogens and Genome Normalization for Literature-based Knowledge Discovery. 23 rd International Conference of the European Federation for Medical Informatics [Internet]. 2011 . Available from: http://person.hst.aau.dk/ska/mie2011/CD/MIE_2011_Content/Posters/031_or_submission_228_2_am_sm_ok.pdfPDF icon MIE2001_DVISHNYAKOVA_fv.pdf (114.87 KB)
Vishnyakova D, Bottone S, Pasche E, Lovis C. Practical implementation of a bridge between legacy EHR system and a clinical research environment. Stud Health Technol Inform. 2014 ;197:29-33.PDF icon SHTI197-0029 (1).pdf (215.19 KB)
Q
Pasche E, Teodoro D, Gobeill J, Ruch P, Lovis C. QA-driven guidelines generation for bacteriotherapy. AMIA .. Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2009 ;2009:509-13.PDF icon QAdriven_2009.pdf (163.46 KB)
U
Teodoro D, Knafou J, Naderi N, Pasche E, Gobeill J, Arighi CN, Ruch P. UPCLASS: a deep learning-based classifier for UniProtKB entry publications. Database [Internet]. 2020 ;2020. Available from: https://doi.org/10.1093/database/baaa026
Pasche E, Gobeill J, Vishnyakova D, Ruch P, Lovis C. Use of controlled vocabularies to improve biomedical information retrieval tasks. Stud Health Technol Inform. 2013 ;192:1068.PDF icon UseOfControlled2013.pdf (122.26 KB)
Pasche E, Gobeill J, Teodoro D, Gaudinat A, Vishnyakova D, Lovis C, Ruch P. A user-friendly tool for medical-related patent retrieval. Studies in health technology and informatics. 2012 ;174:121-5.PDF icon userfriendly_2012.pdf (621.48 KB)
Vishnyakova D, Pasche E, Ruch P. Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database. Database [Internet]. 2012 ;2012. Available from: http://database.oxfordjournals.org/content/2012/bas050.full.pdf?keytype=ref&ijkey=cUFGIEaFMb9xzKY
Pasche E, Gobeill J, Teodoro D, Vishnyakova D, Gaudinat A, Ruch P, Lovis C. Using multimodal mining to drive clinical guidelines development. Studies in health technology and informatics. 2011 ;169:477-81.PDF icon UsingMultimodal_2011.pdf (206.92 KB)
Vishnyakova D, Pasche E, Lovis C, Ruch P. Utilization of ontology look-up services in information retrieval for biomedical literature. Stud Health Technol Inform. 2013 ;186:155-9.PDF icon efm2013.pdf (274.96 KB)

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