BITEM Biblio

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Author Title [ Type(Desc)] Year
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Conference Paper
Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: IEEE Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE Nuclear Science Symposium Conference Record, 2008. NSS'08. ; 2008. pp. 3475–3482.
Bagliesi G, Bauerdick L, Belforte S, Bloom K, Bockelman B, Bonacorsi D, Brew C, D'Hondt J, Egeland R, Elgammal S, et al. The CMS data transfer test environment in preparation for LHC data taking. In: Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. Nuclear Science Symposium Conference Record, 2008. NSS'08. IEEE. IEEE; 2008. pp. 3475–3482.PDF icon GBNSSMIC2008.pdf (626.57 KB)
Ruch P, Gaudinat A. Comparing corpora and lexical ambiguity. In: Proceedings of the Workshop on Comparing Corpora. Proceedings of the Workshop on Comparing Corpora. Association for Computational Linguistics; 2000. pp. 14–19. Available from: http://bitem.hesge.ch/sites/default/files/biblio/RUCH_2000.pdfPDF icon RUCH_2000.pdf (514.87 KB)
Journal Article
Ehrler F, Ruch P, Geissbuhler A, Lovis C. Challenges and methodology for indexing the computerized patient record. Studies in health technology and informatics. 2007 ;129(Pt 1):417-21.
Vishnyakova D, Pasche E, Gobeill J, Gaudinat A, Lovis C, Ruch P. Classification and prioritization of biomedical literature for the comparative toxicogenomics database. Studies in health technology and informatics. 2012 ;180:210-4.PDF icon pmid22874182.pdf (177.05 KB)
Gobeill J, Pasche E, Vishnyakova D, Ruch P. Closing the loop: from paper to protein annotation using supervised Gene Ontology classification. Database (Oxford). 2014 ;2014.PDF icon Closing the loop.pdf (362.62 KB)
Gaudinat A. Closing the loops in biomedical informatics from theory to daily practice. Yearbook of medical informatics. 2009 :37-9.
Buchmuller O, Bonacorsi D, Fanzago F, Gowdy S, Kreuzer P, Malgeri L, Mankel R, Metson S, Panzer-Steindel B, Afonso Sanches J, et al. The CMS CERN Analysis Facility (CAF). Journal of Physics: Conference Series. 2010 ;219:052022.PDF icon The CMS CERN Analysis Facility (CAF).pdf (933.69 KB)
Gaudinat A, Grabar N, Boyer C. Combination of heterogeneous criteria for the automatic detection of ethical principles on health web sites. AMIA .. Annual Symposium proceedings / AMIA Symposium. AMIA Symposium [Internet]. 2007 :264-8. Available from: http://bitem.hesge.ch/sites/default/files/biblio/AMIA-0862-S2007.pdfPDF icon AMIA-0862-S2007.pdf (169.51 KB)
Anton BP, Chang Y-C, Brown P, Choi H-P, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, et al. The COMBREX project: design, methodology, and initial results. PLoS Biol. 2013 ;11(8):e1001638.PDF icon Combrex.pdf (508.12 KB)
Humphrey SM, Névéol A, Gobeil J, Ruch P, Darmoni SJ, Browne A. Comparing a Rule Based vs. Statistical System for Automatic Categorization of MEDLINE Documents According to Biomedical Specialty. Journal of the American Society for Information Science and Technology (Print). 2009 ;60(12):2530-2539.
Baud RH, Ruch P, Gaudinat A, Fabry P, Lovis C, Geissbuhler A. Coping with the variability of medical terms. Studies in health technology and informatics. 2004 ;107(Pt 1):322-6.
Teodoro D, Pasche E, Vishnyakova D, De Vloed B, Depraetere K, Ruch P, Lovis C. A cross-site antimicrobial resistance surveillance system using semantic web technologies. BMC Proceedings [Internet]. 2011 ;5:O35. Available from: http://www.biomedcentral.com/1753-6561/5/S6/O35
Pasche E, Gobeill J, Mottin L, Mottaz A, Teodoro D, Van Rijen P, Ruch P. Customizing a Variant Annotation-Support Tool: an Inquiry into Probability Ranking Principles for TREC Precision Medicine. TREC 2017 Proceedings [Internet]. 2018 . Available from: https://trec.nist.gov/pubs/trec26/papers/BiTeM-PM.pdfPDF icon BiTeM-PM-2017.pdf (318.65 KB)