BITEM Biblio

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2010
Teodoro D, Gobeill J, Pasche E, Ruch P, Vishnyakova D, Lovis C. Automatic IPC encoding and novelty tracking for effective patent mining. In: The 8th NTCIR Workshop Meeting on Evaluation of Information Access Technologies: Information Retrieval, Question Answering, and Cross-Lingual Information Access. The 8th NTCIR Workshop Meeting on Evaluation of Information Access Technologies: Information Retrieval, Question Answering, and Cross-Lingual Information Access. Tokyo, Japan; 2010. pp. 309-317. Available from: http://research.nii.ac.jp/ntcir/workshop/OnlineProceedings8/NTCIR/03-NTCIR8-PATMN-TeodoroD.pdfPDF icon BiTeM-PATMN-NTCIR8.pdf (313.05 KB)
Teodoro D, Gobeill J, Pasche E, Vishnyakova D, Ruch P, Lovis C. Automatic Prior Art Searching and Patent Encoding at CLEF-IP '10. In: CLEF (Notebook Papers/LABs/Workshops). CLEF (Notebook Papers/LABs/Workshops). ; 2010. Available from: http://clef2010.org/resources/proceedings/clef2010labs_submission_119.pdfPDF icon Automatic prior art searching and patent encoding at CLEF-IP '10.pdf (293.03 KB)
Gobeill J, Gaudinat A, Pasche E, Teodoro D, Vishnyakova D, Ruch P. BiTeM site report for TREC Chemistry 2010: Impact of Citations Feedback for Patent Prior Art Search and Chemical Compounds Expansion for Ad Hoc Retrieval. 2010 .
Choquet R, Qouiyd S, Ouagne D, Pasche E, Daniel C, Boussaïd O, Jaulent M-C. The Information Quality Triangle: a methodology to assess clinical information quality. Studies in health technology and informatics. 2010 ;160(Pt 1):699-703.
Gobeill J, Pasche E, Teodoro D, Ruch P. Simple Pre and Post Processing Strategies for Patent Searching in CLEF Intellectual Property Track 2009. Multilingual Information Access Evaluation I. Text Retrieval Experiments. 2010 ;6241:444–451.
2011
Gobeill J, Gaudinat A, Pasche E, Teodoro D, Vishnyakova D, Ruch P. BiTeM group report for TREC Medical Records Track 2011. 2011 .PDF icon RUCH_BitemGroupeTRECmedical2011.pdf (285.04 KB)
Teodoro D, Pasche E, Vishnyakova D, De Vloed B, Depraetere K, Ruch P, Lovis C. A cross-site antimicrobial resistance surveillance system using semantic web technologies. BMC Proceedings [Internet]. 2011 ;5:O35. Available from: http://www.biomedcentral.com/1753-6561/5/S6/O35
Teodoro D, Choquet R, Schober D, Mels G, Pasche E, Ruch P, Lovis C. Interoperability driven integration of biomedical data sources. Stud Health Technol Inform. 2011 ;169:185-189.PDF icon DTMIE2011.pdf (525.97 KB)
Pasche E, Teodoro D, Gobeill J, Vishnyakova D, Ruch P, Lovis C. KART, a knowledge authoring and refinement tool for clinical guidelines development. BMC Proceedings [Internet]. 2011 ;5:O49. Available from: http://www.biomedcentral.com/1753-6561/5/S6/O49PDF icon KART_2011.pdf (170.85 KB)
Vishnyakova D, Pasche E, Teodoro D, Ruch P, Lovis C. Pathogens and Genome Normalization for Literature-based Knowledge Discovery. 23 rd International Conference of the European Federation for Medical Informatics [Internet]. 2011 . Available from: http://person.hst.aau.dk/ska/mie2011/CD/MIE_2011_Content/Posters/031_or_submission_228_2_am_sm_ok.pdfPDF icon MIE2001_DVISHNYAKOVA_fv.pdf (114.87 KB)
Pasche E, Gobeill J, Teodoro D, Vishnyakova D, Gaudinat A, Ruch P, Lovis C. Using multimodal mining to drive clinical guidelines development. Studies in health technology and informatics. 2011 ;169:477-81.PDF icon UsingMultimodal_2011.pdf (206.92 KB)
2012
Pasche E, Gobeill J, Teodoro D, Gaudinat A, Vishnykova D, Lovis C, Ruch P. An advanced search engine for patent analytics in medicinal chemistry. Studies in health technology and informatics. 2012 ;180:204-9.PDF icon advancedsearchengine_2012.pdf (632.5 KB)
Pasche E, Gobeill J, Teodoro D, Vishnyakova D, Huttner A, Ruch P, Lovis C. Assister la création de guides de bonnes pratiques par des techniques de recherche d’information. Swiss Medical Informatics [Internet]. 2012 ;28. Available from: http://157.161.181.107/smi/index.php/smiojs/article/view/15PDF icon assistercreation_2012.pdf (356.21 KB)
Teodoro D, Pasche E, Gobeill J, Emonet S, Ruch P, Lovis C. Building a transnational biosurveillance network using semantic web technologies: requirements, design, and preliminary evaluation. Journal of Medical Internet Research [Internet]. 2012 ;14:e73. Available from: http://www.jmir.org/2012/3/e73/
Vishnyakova D, Pasche E, Gobeill J, Gaudinat A, Lovis C, Ruch P. Classification and prioritization of biomedical literature for the comparative toxicogenomics database. Studies in health technology and informatics. 2012 ;180:210-4.PDF icon pmid22874182.pdf (177.05 KB)
Pasche E, Gobeill J, Oezdemir-Zaech F, Vachon T, Lovis C, Ruch P. Development of a text search engine for medicinal chemistry patents. EMBnet.journal [Internet]. 2012 ;18(Suppl B). Available from: http://journal.embnet.org/index.php/embnetjournal/article/view/545PDF icon Developmenttext_2012.pdf (82.57 KB)
Vishnyakova D, Pasche E, Douglas T, Lovis C, Ruch P. Pathogens and Gene Product Normalization in the Biomedical Literature. In: Large Scale Projects in Ehealth: Partnership in Modernization. Large Scale Projects in Ehealth: Partnership in Modernization. Ios PressInc; 2012. pp. 89–93.PDF icon STC2012_Vishnyakova.pdf (294.94 KB)
Vishnyakova D, Pasche E, Ruch P. Selection of relevant articles for curation for the Comparative Toxicogenomic Database. 2012 BioCreative Workshop [Internet]. 2012 :31-38. Available from: http://www.biocreative.org/media/store/files/2012/Proceedings_BC2012_.pdf
Vishnyakova D, Pasche E, Lovis C, Ruch P. System zur Unterstützung der Kuration der Toxikogenomik in der medizinischen Literatur. In: Swiss Medical Informatics. Vol. 28. Swiss Medical Informatics. ; 2012. Available from: http://www.medical-informatics.ch/index.php/smiojs/article/view/6

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